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PDSML-LN1+

PDSML-LN2+

PDSML-E+

USER’S MANUAL

Revision 1.1b

Manual Revision: Rev. 1.1b

Release Date: June 9, 2009

Unless you request and receive written permission from SUPER MICRO COMPUTER, INC., you

may not copy any part of this document.

Information in this document is subject to change without notice. Other products and companies

referred to herein are trademarks or registered trademarks of their respective companies or mark

holders.

Printed in the United States of America

The information in this User’s Manual has been carefully reviewed and is believed to be accurate.

The vendor assumes no responsibility for any inaccuracies that may be contained in this document,

makes no commitment to update or to keep current the information in this manual, or to notify any

person or organization of the updates. Please Note: For the most up-to-date version of this

manual, please see our web site at www.supermicro.com.

Super Micro Computer, Inc. ("Supermicro") reserves the right to make changes to the product

described in this manual at any time and without notice. This product, including software, if any,

and documentation may not, in whole or in part, be copied, photocopied, reproduced, translated or

reduced to any medium or machine without prior written consent.

IN NO EVENT WILL SUPER MICRO COMPUTER, INC. BE LIABLE FOR DIRECT, INDIRECT,

SPECIAL, INCIDENTAL, SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE

USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION, EVEN IF ADVISED OF

THE POSSIBILITY OF SUCH DAMAGES. IN PARTICULAR, SUPER MICRO COMPUTER, INC.

SHALL NOT HAVE LIABILITY FOR ANY HARDWARE, SOFTWARE, OR DATA STORED OR USED

WITH THE PRODUCT, INCLUDING THE COSTS OF REPAIRING, REPLACING, INTEGRATING,

INSTALLING OR RECOVERING SUCH HARDWARE, SOFTWARE, OR DATA.

Any disputes arising between manufacturer and customer shall be governed by the laws of Santa

Clara County in the State of California, USA. The State of California, County of Santa Clara shall

be the exclusive venue for the resolution of any such disputes. Super Micro's total liability for all

claims will not exceed the price paid for the hardware product.

FCC Statement: This equipment has been tested and found to comply with the limits for a Class A

digital device pursuant to Part 15 of the FCC Rules. These limits are designed to provide reason-

able protection against harmful interference when the equipment is operated in a commercial

environment. This equipment generates, uses, and can radiate radio frequency energy and, if not

installed and used in accordance with the manufacturer’s instruction manual, may cause harmful

interference with radio communications. Operation of this equipment in a residential area is likely

to cause harmful interference, in which case you will be required to correct the interference at your

own expense.

California Best rnia Best Management Practices Regulations for Perchlorate Materials: This Per-

chlorate warning applies only to products containing CR (Manganese Dioxide) Lithium coin cells.

“Perchlorate Material-special handling may apply. See www.dtsc.ca.gov/hazardouswaste/perchlo-

rate”

WARNING: Handling of lead solder materials used in this

product may expose you to lead, a chemical known to the

State of California to cause birth defects and other repro-

ductive harm.

Preface

About This Manual

Thi s man ual is wr itte n for sys tem in teg rato rs, PC te chn ici ans and

knowledgeable PC users. It provides information for the installation and use of the

PDSML-LN1+/PDSML-LN2+/PDSML-E+ motherboard. It supports single

Intel® Xeon® 3200/3000, Core™ 2 Duo Series, Pentium

® D (Dual-Core), Pentium

4, and Celeron® D LGA (Land Grid Array) 775 Processors at system bus speeds of

1066/800/533 MHz. The processor is housed in a Flip-Chip Land Grid Array (FC-

LGA4) package that interfaces with the motherboard via an LGA775 socket. The

PDSML-LN1+/PDSML-LN2+/PDSML-E+ also supports Intel Hyper-Threading (HT)

technology, EM64T technology, Enhanced Intel SpeedStep

® Technology (EIST) and

Matrix Storage Technology. Please refer to the motherboard specications pages

on our web site (http://www.supermicro.com/products/motherboard/) for updates or

visit Intel's web site for processor support. This product is intended to be installed

and serviced by a professional technician.

Manual Organization

Chapter 1 describes features, specications and detailed information about the

motherboard and the chipset.

Chapter 2 provides hardware installation instructions. Read this chapter when

installing the processor, memory modules and other hardware components into

the system.

Chapter 3 describes troubleshooting procedures for the video, the memory and the

system setup stored in CMOS if you encounter problems.

Chapter 4 includes an introduction to BIOS and provides detailed information on

running the CMOS Setup utility.

Appendix A Appendix B Apand list BIOS POST Error Codes and Messages. -

pendix C provides Software Installation Instructions.

Conventions Used in the Manual

Special attention should be given to the following symbols for proper installation

of the components and to prevent damage done to the components or injury to

yourself:

Danger/Caution: Instructions to be strictly followed to prevent catastrophic

system failure or to avoid bodily injury.

Warning: Important information given to ensure proper system installation or

to prevent damage to the components.

Note: Additional Information given to differentiate various models or to ensure

correct system setup.

Preface

iii

PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual

Table of Contents

Preface

About This Manual ...................................................................................................... iii

Manual Organization ....................................................................................................iii

Conventions Used in the Manual ..................................................................................iii

Chapter 1: Introduction

1-1 Overview ......................................................................................................... 1-1

Checklist ..................................................................................................... 1-1

Contacting Supermicro ............................................................................... 1-2

PDSML-LN1+/PDSML-LN2+/PDSML-E+ Image ....................... 1-3

PDSML-LN1+/PDSML-LN2+/PDSML-E+ Layout ....................... 1-4

PDSML-LN1+/PDSML-LN2+/PDSML-E+ Quick Reference ........ 1-5

Motherboard Features ................................................................................ 1-6

Intel 3000/3010 Chipset: System Block Diagram .................................... 1-8

1-2 Chipset Overview ........................................................................................... 1-9

1-3 Special Features ........................................................................................... 1-10

1-4 PC Health Monitoring ................................................................................... 1-10

1-5 ACPI Features ............................................................................................... 1-11

1-6 Power Supply .................................................................................................. 1-12

1-7 Super I/O ........................................................................................................ 1-13

1-8 Intelligent Platform Management Interface (IPMI) .......................................... 1-13

Chapter 2: Installation

2-1 Electro-Static Sensitive Devices ..................................................................... 2-1

2-2 Processor and Heatsink Installation ............................................................... 2-2

2-3 Mounting the Motherboard in the Chassis ..................................................... 2-5

2-4 Installing DDR 2 Memory .............................................................................. 2-6

2-5 Control Panel Connectors/IO Ports ................................................................. 2-8

A. Back Panel Connectors/IO Ports ................................................................. 2-8

B. Front Control Panel ...................................................................................... 2-8

C. Front Control Panel Pin Denitions ............................................................. 2-9

NMI Button ............................................................................................... 2-9

Power LED ............................................................................................... 2-9

HDD LED ................................................................................................. 2-10

NIC1/NIC2 LED Indicators ..................................................................... 2-10

Overheat/Fan Fail LED ............................................................................2-11

Power Fail LED .........................................................................................2-11

Reset Button ............................................................................................ 2-12

Power Button ........................................................................................... 2-12

2-6 Connecting Cables ....................................................................................... 2-13

ATX Power Connector .......................................................................... 2-13

Processor Power Connector ................................................................. 2-13

Serial Ports ............................................................................................... 2-14

Chassis Intrusion ...................................................................................... 2-14

Universal Serial Bus (USB) ...................................................................... 2-15

GLAN (Ethernet Ports) ............................................................................. 2-15

ATX PS/2 Keyboard and Mouse Ports ..................................................... 2-16

Speaker Connector ................................................................................ 2-16

Fan Headers .......................................................................................... 2-17

Wake-On-Ring .......................................................................................... 2-18

Wake-On-LAN .......................................................................................... 2-18

VGA Connector ........................................................................................ 2-19

Power LED ............................................................................................... 2-19

Power Fault ..............................................................................................2-20

Power SMB Connector ............................................................................. 2-20

Power Alarm Reset .................................................................................. 2-21

2-7 Jumper Settings ............................................................................................ 2-22

Explanation of Jumpers ......................................................................... 2-22

GLAN Enable/Disable ............................................................................ 2-22

CMOS Clear ........................................................................................... 2-23

VGA Enable .............................................................................................. 2-23

Power Force On Enable ........................................................................... 2-24

I2C Bus to PCI/PCI-E Slots ...................................................................... 2-24

2-8 Onboard Indicators ....................................................................................... 2-25

GLAN LEDs .............................................................................................. 2-25

2-9 Floppy, Hard Disk Drive, and IPMI 2.0 Connections .................................... 2-26

Floppy Connector .................................................................................... 2-26

IDE Connectors ........................................................................................ 2-27

IPMI 2.0 Slot ............................................................................................. 2-27

Chapter 3: Troubleshooting

3-1 Troubleshooting Procedures ........................................................................... 3-1

Before Power On ....................................................................................... 3-1

No Power ................................................................................................... 3-1

No Video .................................................................................................. 3-1

Table of Contents

Memory Errors ........................................................................................... 3-2

Losing the System’s Setup Conguration ................................................ 3-2

3-2 Technical Support Procedures ........................................................................ 3-2

3-3 Frequently Asked Questions ........................................................................... 3-3

3-4 Returning Merchandise for Service ................................................................. 3-4

Chapter 4: BIOS

4-1 Introduction ....................................................................................................... 4-1

4-2 Running Setup ................................................................................................. 4-2

4-3 Main BIOS Setup ............................................................................................. 4-3

4-4 Advanced Setup ............................................................................................... 4-7

4-5 Security Setup ............................................................................................... 4-18

4-6 Boot Setup ...................................................................................................... 4-19

4-7 Exit .................................................................................................................. 4-20

Appendices:

Appendix A: BIOS POST Error Messages ................................................................A-1

Appendix B: BIOS POST Codes ................................................................................B-1

Appendix C: Installing Software Drivers and the Operating System .........................C-1

PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual

Chapter 1: Introduction

1-1

Chapter 1

Introduction

1-1 Overview

Checklist

Congratulations on purchasing your computer motherboard from an acknowledged

leader in the industry. Supermicro motherboards are designed with the utmost

attention to detail to provide you with the highest standards in quality and perfor-

mance.

Please check that the following items have all been included with your motherboard.

If anything listed here is damaged or missing, contact your retailer.

All the items below are included in the retail box only

One (1) Supermicro Mainboard

One (1) IDE cable (CBL-0036L-02)

One (1) oppy drive ribbon cable (CBL-0022L)*

Four (4) SATA cables (CBL-0044L)*

One (1) IO Shield (CSE-PT07L)*

One (1) IO Shield (CSE-PT2)**

One (1) Supermicro CD containing drivers and utilities

One (1) User's/BIOS Manual

*For the PDSML-LN2+ and PDSML-E+ only

**For the PDSML-LN1+ only

1-2

PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual

Contacting Super Micro

Headquarters

Address: Super Micro Computer, Inc.

980 Rock Ave.

San Jose, CA 95131 U.S.A.

Tel: +1 (408) 503-8000

Fax: +1 (408) 503-8008

Email: marketing@supermicro.com (General Information)

support@supermicro.com (Technical Support)

Web Site: www.supermicro.com

Europe

Address: Super Micro Computer B.V.

Het Sterrenbeeld 28, 5215 ML

's-Hertogenbosch, The Netherlands

Tel: +31 (0) 73-6400390

Fax: +31 (0) 73-6416525

Email: sales@supermicro.nl (General Information)

support@supermicro.nl (Technical Support)

rma@supermicro.nl (Customer Support)

Asia-Pacic      

Address: Super Micro, Taiwan

4F, No. 232-1 Liancheng Road

Chung-Ho 235, Taipei Hsien, Taiwan, R.O.C.

Tel: +886-(2) 8226-3990

Fax: +886-(2) 8226-3991

Web Site: www.supermicro.com.tw

Technical Support:

Email: support@supermicro.com.tw

Tel: 886-2-8228-1366, ext.132 or 139

Chapter 1: Introduction

1-3

PDSML-LN1+/PDSML-LN2+/PDSML-E+ Image

An Important Note to the User

• All images and layouts shown in this manual were based upon the latest PCB

Revision available at the time of publishing of this manual. The motherboard

you've received may or may not look exactly the same as the graphics shown

in this manual.

• Please see Note 5 on Page 1-4.

1-4

PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual

Important Notes to the User

• Note 1 All images and graphics shown in this manual were based upon the

latest PCB Revision available at the time of publishing of this manual. The

motherboard you've received may or may not look exactly the same as the

graphics shown in this manual.

• Note 2 See Chapter 2 for detailed information on jumpers, I/O ports and JF1

front panel connections.

• Note 3 " " indicates the location of Pin 1.

• Note 4 When the LE1 LED is on, onboard power is on. Maker sure to unplug

the AC power cord before installing or removing components.

• Note 5 IPMI and LAN2 are available on the PDSML-LN2+ and PDSML-E+

only. To use IPMI, install the optional AOC-SIM1U/SIM1U+ or AOC-SIMLC

IPMI card on the IPMI slot (J19). Please refer to page 1-13 for more informa-

tion.

Motherboard Layout

(not drawn to scale)

SUPER PDSML-LN1+/LN2 +/E+

L GA 775 CPU

KB/MS

JLAN1

Intel 3000

North Br idg e

4naF

24-Pin ATX PWR

I RCH7

South Bridge

J 2 8 8-pin PWR

Battery

J 9

USB 1/2

J 1 5

VGA

JG1

JLAN2

COM2 Floppy

DIMM 2B

PCI-E x8

BIOS

JPW1

J27

IDE

JPF

DIMM 1B

DIMM 2A

DIMM 1A DIMM 1

DIMM 2

DIMM 3

DIMM 4

Fan1 JPW2

J 8

Fan5

LAN

CTRL2

JPL2

JPL1

WOL

JWOR

rezzuB

J45

JL1

JI2C1

JBT1

J46

SATA1

JPG1

Fan3

FP CTRL

JF1

Fan2

USB3/4

LAN

CTRL1

SPKR

JI 2C2

IPMI J19

Slot6 SBX: PCI-33 MH z

VGA

CTRL

PCI2

J10

PCI-E x4

Slot5

PCI1

Slot4 PCI-33 MH z

LE3

COM1

J 3 1

VGA

Memory

LE4

LE1

JS 1

JS 2

JS 3

JS 4

JLED

Fan6

CPU

Fan

JPR1

PW 3

PWRFault

PW 4

PWR SMB

(*LN2+)

USB5/6 SATA0 SATA2

SATA3

PDSML-E+ Only

3010

Intel

S I/O

Chapter 1: Introduction

1-5

PDSML-LN1+/PDSML-LN2+/PDSML-E+ Quick Reference

Jumpers Description Default Setting

JBT1 CMOS Clear See Section 2-7

JI2C1/JI2C2 I2C Bus to PCI Slots 1/2 Open (Disabled)

JPF Power Force-On Open (Disabled)

JPG1 VGA Enable Pins 1-2 (Enabled)

JPL1/JPL2 (Note) Giga-bit LAN 1/2 Enable Pins 1-2 (Enabled)

Connectors Description

24-PIn ATX (JPW1) ATX 24-pin Power Connector

8-Pin PWR (JPW2) 12V 8-pin PWR Connector

Alarm Reset (JPR1) Redundant Power Alarm Reset

Chassis Intrusion (JL1) Chassis Intrusion Header

COM1 (J31), COM2 COM Port 1 & COM 2 Header

DIMM#1A,#2A,#1B,#2B Memory (DIMM) Slots (DIMM 1-DIMM 4)

Fans 1-6 System Fan Headers (Fans 1-5), Fan6: CPU Fan

FP Control (JF1) Front Panel Control Header

Floppy Connector (J27) Floppy Disk Connector

IDE (J3) IDE#1 Slot

IPMI (Note) IPMI 2.0 Slot

KB/MS (J28) PS/2 Keyboard/Mouse Connectors

LAN1-LAN2 (JLAN1/2)(Note) Ethernet RJ45 (Gigabit LAN) Port1/Port2 Connections

Power Fault (PW3) Power Fault Header

Power LED (JLED) PWR LED Header

Power SMB (I2C) (PW4) Power SMB (System Management Bus) Connector

SATA 0-3 Intel SATA Ports (#1-#4)

Slot 4 PCI 32-bit 33MHz slot

Slot 5 PCI-Express x4 slot

Slot 6 + SBX PCI-Express x8 slot + SBX: PCI 32-bit 33MHz slot

Speaker (J9) Speaker Connector (Pins 3-4:Internal,Pins 1-4:External)

USB1/2 (J15) Back Panel Universal Serial Bus Ports 1,2

USB3/4 (J46),USB5/6 (J45) Front Panel Accessible USB Ports 3,4,5,6

VGA (JG1) VGA Connector

WOL (WOL) Wake On LAN header

WOR (JWOR) Wake On Ring header

LED Indicator Description (*(Refer to Addendum A)

LE 1 Onboard PWR warning LED Indicator

LE3/LE4 BIOS POST Code Indicators

Note: JPL2, IPMI and LAN2 are available on the PDSML-LN2+ and PDSML-E+only.

Please refer to Note 5 on the previous page.

1-6

PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual

Motherboard Features

Processor

• Single Intel Xeon 3200/3000/Core 2 Duo Series//Pentium D dual-core/Pentium

4/Celeron D processors at system bus speeds of 1066/800/533 MHz.

• Hyper-Threading (HT), EM64T, Enhanced Intel SpeedStep (EIST) supported

The EM64T Feature is supported when:

• 64-bit OS (Windows XP Professional x64 Ed, Server 2003x64 Ed.) and

• 64-bit drivers for all MB components, devices and add-on cards are installed

on the motherboard.

Hyper-Threading (HT) Technology is supported when:

• A CPU that supports Hyper-Threading Technology is used,

• An OS that supports HT is installed onboard, including Windows XP/2003

Server and Linux 2.4x. (Under Linux, use the HT compiler to compile the code.

For other operating systems, be sure to disable the HT feature in the BIOS.)

• HT features are enabled in the BIOS (under the "Advanced" Setting) before

a supported OS is installed. (Note: visit www.Intel.com for CPU support and

driver updates.)

Memory

• Four DIMM slots support dual Channel DDR2 667/533 MHz up to 8 GB of Unbuf-

fered ECC/Non-ECC SDRAM.

Chipset

• Intel 3000 (PDSML-LN1+ and PDSML-LN2+)

• Intel 3010 (PDSML-E+)

• Intel ICH7R

Expansion Slots

• Two (2) PCI 32-Bit/33 MHz slots (Slot 4 & SBX)

• Two (2) PCI-Express slots: x4 (Slot 5) & x8 (Slot 6)

BIOS

• 8Mb Firmware Hub, Phoenix

® BIOS  

• DMI 2.3, PCI 2.2, ACPI 1.0, Plug and Play (PnP), SMBIOS 2.3, Hardware BIOS

Virus Protection

PC Health Monitoring

• Onboard voltage monitors for CPU core, Memory, +1.5V, +1.8V, +3.3V, +5V, +5V

Standby, +12V, 12V, Vbatt and VTT. −

• Status monitor for fan speed & System Overheat/Fan Fail LED/Control

• Pulse Width Modulation Fan Control & Low noise fan speed control

• SuperDoctor III, NMI

• System Resource alert via SuperDoctor III

Produktspecifikationer

Varumärke:	Supermicro
Kategori:	moderkort
Modell:	PDSML-E+
Färg på produkten:	Zwart
Vikt:	160 g
Strömförsörjning:	DC 7.5V~12V
Indikator ljus:	Ja
Certifiering:	CE, FCC, RoHS
Frekvens:	13.56 MHz
Maximalt avstånd:	30 m
Mått (B x D x H):	95 x 23 x 108 mm
Drifttemperatur (TT):	-35 - 65 °C
Relativ luftfuktighet i drift (VV):	10 - 90 procent